>ENSGALT00000009680-2 (aa284-352 of ENSGALT00000009680, Smart)  Gallus_gallus 
YHYAATVEVFSTISGLITVQSDGTIQCIKDSFALTLFGYEKKELVGKNITFLIPGFYNNMERSDDCSL
>KCNH1-1 (aa16-92 of ENSGALT00000016057, Smart)  Gallus_gallus 
TFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKSSTCSFMYGELTDKDTIDKVRQTFENYE
>NCOA1-1 (aa109-176 of ENSGALT00000026818, Smart)  Gallus_gallus Q5F393_CHICK-1 (aa109-176 of ENSGALT00000026819, Smart)  Gallus_gallus 
SLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQEELMNTSVYSILHVGDHTEFVKNLLPKSL
>ENSGALT00000006888-2 (aa257-327 of ENSGALT00000006888, Smart)  Gallus_gallus ENSGALT00000006889-2 (aa262-332 of ENSGALT00000006889, Smart)  Gallus_gallus 
LQPPSILEIRTKNMIFRTKHKLDFTPLACDAKGKIVLGYTEAELRMCGTGYQFIHAADMLYCAENHIRMM
>HIF1A_CHICK-2 (aa229-295 of ENSGALT00000019364, Smart)  Gallus_gallus Q3S4W8_CHICK-2 (aa230-296 of ENSGALT00000037380, Smart)  Gallus_gallus 
PSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMF
>ENSGALT00000029129-2 (aa352-420 of ENSGALT00000029129, Smart)  Gallus_gallus Q98SN3_CHICK-2 (aa370-438 of ENSGALT00000001095, Smart)  Gallus_gallus 
PNCTDMSNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVV
>Q9I9E2_CHICK-2 (aa252-322 of ENSGALT00000017616, Smart)  Gallus_gallus 
LQPPSILEIRTKNFIFRTKHKLDFTPTGCDAKGKIVLGYTEAELCMRGTGYQFIHAADMLYCAENHVRMM
>ENSGALT00000010400-1 (aa140-207 of ENSGALT00000010400, Smart)  Gallus_gallus ARNT2-1 (aa125-192 of ENSGALT00000010398, Smart)  Gallus_gallus 
ELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSE
>Q5F376_CHICK-1 (aa113-180 of ENSGALT00000025166, Smart)  Gallus_gallus Q5F376_CHICK-1 (aa113-180 of ENSGALT00000025163, Smart)  Gallus_gallus 
ALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQEELMNTSIYSILHVGDHNEFVKILLPKSL
>HIF1A_CHICK-1 (aa87-153 of ENSGALT00000019364, Smart)  Gallus_gallus Q3S4W8_CHICK-1 (aa87-153 of ENSGALT00000037380, Smart)  Gallus_gallus 
ELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFDLTGHSVFDFTHPCDHEELREMLTHRN
>BMAL1_CHICK-1 (aa153-220 of ENSGALT00000032732, Smart)  Gallus_gallus 
ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSD
>ENSGALT00000006888-1 (aa104-170 of ENSGALT00000006888, Smart)  Gallus_gallus ENSGALT00000006889-1 (aa103-169 of ENSGALT00000006889, Smart)  Gallus_gallus 
PEGELLLQALNGFVLVVTSEGLIFYSSHTIQDYLGFHQTDVMHQSIFKLIHTEDHQEFRRNLHWAL
>ENSGALT00000037540-1 (aa110-176 of ENSGALT00000037540, Smart)  Gallus_gallus Q9IAI1_CHICK-1 (aa109-175 of ENSGALT00000037539, Smart)  Gallus_gallus CLOCK_CHICK-1 (aa109-175 of ENSGALT00000022394, Smart)  Gallus_gallus 
EFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHL
>Q9I9E2_CHICK-1 (aa93-159 of ENSGALT00000017616, Smart)  Gallus_gallus 
LEGELLLQALNGFVLVVTADALVFYVSSTIQDYLGFQQSDIIHQSVFELIHTEDRPEFQRQLHWAL
>BMAL1_CHICK-2 (aa335-401 of ENSGALT00000032732, Smart)  Gallus_gallus 
PVNGEIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVL
>LOC424033-2 (aa261-330 of ENSGALT00000008831, Smart)  Gallus_gallus 
QPFSILKLQTKMLFFQSKHKLDFTPIACDSWGRVVLGYTEAELCSRGSGYQFVHTADIICCAESHVRAP
>ENSGALT00000014751-2 (aa243-309 of ENSGALT00000014751, Smart)  Gallus_gallus 
KELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLM
>Q8JH32_CHICK-1 (aa172-239 of ENSGALT00000033729, Smart)  Gallus_gallus PER2_CHICK-1 (aa231-298 of ENSGALT00000008858, Smart)  Gallus_gallus 
ITSEYIMKNADMFAVAVSLITGKIVYISDQAAAILRCKRSYFKNAKFVELLAPQDVSVFYTSTTPYR
>NCOA1-2 (aa248-317 of ENSGALT00000026818, Smart)  Gallus_gallus Q5F393_CHICK-2 (aa248-317 of ENSGALT00000026819, Smart)  Gallus_gallus 
LPRPAAVTPSESFVTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQGREPSYAKQLFQEVM
>SIM1-1 (aa79-145 of ENSGALT00000024939, Smart)  Gallus_gallus 
ELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQ
>Q9DG35_CHICK-1 (aa67-127 of ENSGALT00000008634, Smart)  Gallus_gallus 
ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVK
>SIM2-1 (aa79-145 of ENSGALT00000025849, Smart)  Gallus_gallus 
ELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGNSIYEYIHPSDHDEMTAVLTAHQ
>ENSGALT00000036585-2 (aa240-307 of ENSGALT00000036585, Smart)  Gallus_gallus NPAS2_CHICK-2 (aa238-305 of ENSGALT00000027080, Smart)  Gallus_gallus 
LKEMCIVEEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLM
>ENSGALT00000009680-1 (aa71-138 of ENSGALT00000009680, Smart)  Gallus_gallus 
QHFLTAARNPNQAIFTVDVTTTEILVANDKACRLLGCSSQELIGQNLSRFISKCNQETWEAVDDEYL
>ENSGALT00000037540-2 (aa265-331 of ENSGALT00000037540, Smart)  Gallus_gallus Q9IAI1_CHICK-2 (aa264-330 of ENSGALT00000037539, Smart)  Gallus_gallus CLOCK_CHICK-2 (aa264-330 of ENSGALT00000022394, Smart)  Gallus_gallus 
KEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLM
>ENSGALT00000000797-2 (aa207-273 of ENSGALT00000000797, Smart)  Gallus_gallus 
YEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMIAIHRKIL
>Q9W7C6_CHICK-1 (aa78-144 of ENSGALT00000016253, Smart)  Gallus_gallus 
QMDNLYLKALEGFIAVVTQDGDMIFLSENVNKYMGLTQVELTGHSIFDFTHPCDHEEIRENLSLKN
>ENSGALT00000036585-1 (aa86-152 of ENSGALT00000036585, Smart)  Gallus_gallus NPAS2_CHICK-1 (aa84-150 of ENSGALT00000027080, Smart)  Gallus_gallus 
EFTQLMLEALDGFIIAVTTGGSIIYVSDSITPLLGHLPCDVLDQNLLNFLPEQEHSEIYKMLSSCM
>SIM2-2 (aa220-286 of ENSGALT00000025849, Smart)  Gallus_gallus 
SAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLL
>ENSGALT00000021857-1 (aa109-175 of ENSGALT00000021857, Smart)  Gallus_gallus 
QEGGLLLESLNGFALVVSADGMIFYASSTIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAM
>NCOA3-1 (aa118-184 of ENSGALT00000007275, Smart)  Gallus_gallus 
SLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSS
>Q9W7C6_CHICK-2 (aa223-289 of ENSGALT00000016253, Smart)  Gallus_gallus 
PSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC
>ENSGALT00000029129-1 (aa167-234 of ENSGALT00000029129, Smart)  Gallus_gallus Q98SN3_CHICK-1 (aa163-230 of ENSGALT00000001095, Smart)  Gallus_gallus 
ELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSE
>PDE8A-1 (aa167-233 of ENSGALT00000009637, Smart)  Gallus_gallus 
NSLFTALEKSQEAIEITSEDHVIQYVNPAFETVMGYQIGELIGKELTEVPINEKKADFLDTINSCI
>ENSGALT00000010400-2 (aa328-394 of ENSGALT00000010400, Smart)  Gallus_gallus ARNT2-2 (aa313-379 of ENSGALT00000010398, Smart)  Gallus_gallus 
CMDMNGMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVV
>LOC424033-1 (aa107-173 of ENSGALT00000008831, Smart)  Gallus_gallus 
PEGDLLLQALNGFVITVTADGYIFYISPTVQNYLGFHQSDLIYQSIYELIHKDDRAAFHCQLHDAV
>SIM1-2 (aa220-286 of ENSGALT00000024939, Smart)  Gallus_gallus 
SAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLL
>ENSGALT00000014751-1 (aa88-154 of ENSGALT00000014751, Smart)  Gallus_gallus 
EFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLVDQNILNFLPEREQSEVYKLLSPRV
>NPAS3-1 (aa136-202 of ENSGALT00000016244, Smart)  Gallus_gallus 
PTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLL
>Q8JH32_CHICK-2 (aa312-378 of ENSGALT00000033729, Smart)  Gallus_gallus PER2_CHICK-2 (aa371-437 of ENSGALT00000008858, Smart)  Gallus_gallus 
YEAPRIPPDKRIFTTTHTPTCLFQDVDERAVPLLGYLPQDLIGTPVLVHLHPNDRPLMLAIHKKIL
>ARNTL2-2 (aa344-410 of ENSGALT00000022820, Smart)  Gallus_gallus BMAL2_CHICK-2 (aa345-411 of ENSGALT00000037361, Smart)  Gallus_gallus 
QKSGEIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHKEVL
>ENSGALT00000000797-1 (aa68-135 of ENSGALT00000000797, Smart)  Gallus_gallus 
LASERTPKNNDTFVAVFSLLSGRIVHISEQAASILNYKKQVLESSRFVELLAPQDASVFYAHTDQSH
>ARNTL2-1 (aa166-233 of ENSGALT00000022820, Smart)  Gallus_gallus BMAL2_CHICK-1 (aa166-233 of ENSGALT00000037361, Smart)  Gallus_gallus 
ELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLIGQSLFDYLHPKDVAKVKEQLSSSD